Archive for July, 2007

Reflections

Wednesday, July 25th, 2007

Looking back, I couldn’t be happier that I decided to dedicate my summer to exploring a very probable future career.  In no other way could I have seen the inner workings of science without the glamor of TV or the insufficiencies of personal description. 

From having a day off to slaving in the lab until 11 at night, from idly browsing through relevant articles to rushing to and fro between 3 experiments, I experienced the total lab package.  I formed a bond with my labmates and a playful sense of competition with the neighboring lab.  Most importantly, I gained an understanding of research as it exists today: western blotting, immunofluorescence under the microscope, cell cultures, ligations, you name it.

If I had a second chance to decide my plans for Summer 2007, I wouldn’t hesitate to choose Howard Hughes Research Fellows all over again.

Career Choices

Saturday, July 14th, 2007

Having heard from a variety of students, either attending grad school or an MD/PhD program, I am quite sure that grad school is in my future.  I can certainly see myself working in a lab for some period of time, though it seems I may tire of it in several years’ time.  However, with a more comprehensive understanding of cell biology, biochemistry, or whatever I choose to go into should come a heightened sense of enthusiasm that could be the driving force behind a lifetime of research.  Just in case I do tire of such a career, the input of the career panel suggested that a broad range of jobs can be pursued with a PhD in science, further assuring my decision for grad school is a good one.  As for the schools to which I’ll apply and hope to attend, I have 3 years to think about that.

Career Choices

Saturday, July 14th, 2007

Having heard from a variety of students, either attending grad school or an MD/PhD program, I am quite sure that grad school is in my future.  I can certainly see myself working in a lab for some period of time, though it seems I may tire of it in several years’ time.  However, with a more comprehensive understanding of cell biology, biochemistry, or whatever I choose to go into should come a heightened sense of enthusiasm that could be the driving force behind a lifetime of research.  Just in case I do tire of such a career, the input of the career panel suggested that a broad range of jobs can be pursued with a PhD in science, further assuring my decision for grad school is a good one.  As for the schools to which I’ll apply and hope to attend, I have 3 years to think about that.

Research Progress

Thursday, July 5th, 2007

In order to discuss the status of my research, let me first explain the objectives of my research.                                                                                                                             
In Dr. Seewaldt’s lab, one of the major focuses centers around finding biomarkers for breast cancer, whether they might lead to preventative treatments or else a diagnosis.  A protein called PELP1 holds promise for providing us with such a biomarker.  PELP1 is a coregulator protein of estrogen receptor (ER) and usually performs its regulation tasks strictly in the nucleus.  However, it’s been recently discovered that certain cancer cell lines contain high amounts of cytoplasmic PELP1.  Here’s where our research comes into play.     
ER, which is typically found in very low levels in normal human mammary epithelial cells (HMECs), is frequently used to identify the pre-cancerous condition, atypia.  Women with atypia are sometimes given the option of Tamoxifen treatment in order to prevent the progression to cancer.  However, not all women respond to this drug, which has many unpleasant effects such as the increased risk of endometrial cancer.  It is suspected that cytoplasmic PELP1 may be present in those women who are resistant to Tamoxifen, activating certain pathways that lead to cell proliferation and hormonal independence.  Furthermore, the harder-to-detect ER-negative forms of atypia and breast cancer cannot be identified based on ER levels; the ER levels appear normal, yet the cells proceed to proliferate and become cancerous.  If we discover cytoplasmic PELP1 in such atypical cells, perhaps the protein can be used as a more efficient detection technique.                                
The first step of our research is to confirm that the mutant PELP1-CYTO plays a part in activating the cancer-promoting AKT and MAPK pathways in ER+ cell lines.  Similarly, we want to see if PELP1-CYTO can exist in and, if so, activates the same pathways.  Next we’ll test if the protein can be transfected into and have the same effect in normal HMECs.  This will tell us if such fluctuations in PELP1-CYTO are evident before cells actually become cancerous.  With later investigation, we’ll take actual RPFNA (an aspiration technique for sampling cells from high risk women) samples and look for evidence of PELP1-CYTO and whether or not it correlates to resistance to Tamoxifen.                           
Currently, we’ve run one western blot to confirm the activation of AKT and MAPK pathways.  However, results were not definitive.  We’ve also performed immunofluorescence with an ER+ breast cancer cell line to experiment with the conditions needed to detect PELP1 most efficiently.  All other efforts (digests, transfections, ligations, western blotting) have been aimed at preparing for future procedures.  By the end of this program, we hope to have determined the effects of PELP1-CYTO in ER+ and ER- breast cancer cell lines as well as in normal HMECs in in vitro models.